Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
OCB32279.1acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)    
Predicted Functional Partners:
OCB32280.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.758
OCB32278.1
DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.658
OCB32277.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.588
OCB32281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
OCB38169.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.471
OCB39678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.457
OCB32148.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.445
OCB38978.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.439
OCB40772.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.432
OCB35244.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.431
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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