STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCB32179.1Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
OCB32147.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
OCB38717.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.888
OCB35531.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.883
OCB39766.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.877
OCB34510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.844
OCB35536.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.842
OCB39735.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.840
OCB38975.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.838
OCB33786.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.811
OCB36643.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.801
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.