Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OCB31722.1PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
OCB31723.1
Inositol 1-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.875
OCB31728.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
OCB31729.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.627
OCB31730.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.579
OCB31721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
OCB31757.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.517
OCB31754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
OCB34919.1
Signal transduction histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
OCB31725.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
OCB31726.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.