Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OCB41242.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
OCB41243.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.957
OCB41246.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.951
OCB41245.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.949
OCB41248.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.948
OCB41244.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.947
OCB41247.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.942
OCB41250.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.880
OCB41262.1
Mannan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.872
OCB41249.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.863
OCB32223.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.838
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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