Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OCB39273.1CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (410 aa)    
Predicted Functional Partners:
OCB39441.1
Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OCB40750.1
acyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
  
     0.766
OCB39277.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.619
OCB39274.1
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.581
OCB39326.1
Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
OCB39278.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.552
OCB39276.1
Dihydrolipoamide acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.538
OCB39327.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.522
OCB39279.1
3-ketosteroid-delta-1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.521
OCB39275.1
Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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