Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OCB37998.1PPOX class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
OCB36908.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.798
OCB37997.1
Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.597
OCB37999.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
OCB39524.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
OCB31309.1
Ring hydroxylating enzyme beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.440
OCB31988.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.426
OCB41261.1
Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.406
OCB34940.1
Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.406
OCB31661.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.401
OCB37763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.401
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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