Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OCB36843.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
OCB36842.1
Glucose-6-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.745
OCB36841.1
6-phosphogluconate dehydrogenase (decarboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
OCB34653.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.711
OCB35479.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
OCB40434.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.645
OCB37265.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.644
OCB35708.1
Adenylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.616
OCB39482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
A5676_14720
Acyl-phosphate glycerol 3-phosphate acyltransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.588
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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