Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OCB36523.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
OCB36522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.805
OCB36521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
OCB40592.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
OCB36524.1
Molecular chaperone Hsp70; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.559
OCB36525.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
OCB36526.1
Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
OCB36568.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
OCB36519.1
MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
OCB36520.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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