Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OCB35576.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (380 aa)    
Predicted Functional Partners:
OCB35575.1
Zinc chelation protein SecC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
OCB32223.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.755
OCB36415.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.748
OCB38185.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
OCB40527.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
     0.729
OCB39481.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
OCB39606.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
OCB32298.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
OCB34716.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
OCB39449.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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