Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OCB35458.1Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family. (513 aa)    
Predicted Functional Partners:
OCB35459.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.857
OCB35460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.844
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.776
OCB35478.1
Fructose-1,6-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.679
OCB32223.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.625
OCB38556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.617
OCB38557.1
DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.602
OCB33514.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.571
OCB40434.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.567
OCB38484.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.562
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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