STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00073Caspase-8; Belongs to the peptidase C14A family. (692 aa)    
Predicted Functional Partners:
WN55_08414
Apoptotic protease-activating factor 1.
    
 0.995
WN55_08636
Death domain-containing adapter protein BG4.
    
 0.983
WN55_00629
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.980
WN55_01710
Apoptosis 2 inhibitor.
   
 0.970
WN55_10326
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.960
WN55_10364
Baculoviral IAP repeat-containing protein 6.
   
 0.929
WN55_00636
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.873
WN55_01709
Apoptosis 1 inhibitor.
   
 0.863
WN55_10896
E3 ubiquitin-protein ligase mind-bomb.
    
 0.825
WN55_02985
E3 ubiquitin-protein ligase MIB2.
    
 0.825
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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