STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_02670RNA polymerase-associated protein Rtf1. (694 aa)    
Predicted Functional Partners:
WN55_02784
RNA polymerase-associated protein CTR9 like protein.
   
 0.998
WN55_07226
Parafibromin.
   
 0.997
WN55_06315
RNA polymerase II-associated factor 1 like protein.
   
 0.997
WN55_02352
FACT complex subunit Ssrp1.
   
 0.994
WN55_09055
Transcription elongation factor SPT5.
    
 
 0.987
WN55_09674
FACT complex subunit spt16.
   
 0.979
WN55_08789
Cyclin-dependent kinase 2-interacting protein.
   
 0.974
WN55_05622
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 
 0.964
WN55_09404
Structural maintenance of chromosomes protein 3.
    
 
 0.949
WN55_08072
WD repeat-containing protein 61.
    
 0.947
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.