STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00617Transmembrane emp24 domain-containing protein. (206 aa)    
Predicted Functional Partners:
WN55_11315
Transmembrane emp24 domain-containing protein bai.
   
 0.999
WN55_05489
Transmembrane emp24 domain-containing protein eca.
   
0.993
WN55_08074
Transmembrane emp24 domain-containing protein 7.
  
0.988
WN55_00881
Surfeit locus protein 4 like protein.
   
 0.903
WN55_05054
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.888
WN55_07290
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.864
WN55_10241
Protein SEC13 like protein; Belongs to the WD repeat SEC13 family.
    
 0.858
WN55_07265
Protein ERGIC-53.
   
 0.836
WN55_10763
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.835
WN55_03088
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.826
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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