STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_09644Roquin. (912 aa)    
Predicted Functional Partners:
WN55_09341
CCR4-NOT transcription complex subunit 1.
   
 
 0.758
WN55_06818
CCR4-NOT transcription complex subunit 7.
    
 
 0.629
WN55_10703
Cell differentiation protein RCD1 like protein.
    
 
 0.612
WN55_07727
CCR4-NOT transcription complex subunit 2.
    
 
 0.611
WN55_00603
CCR4-NOT transcription complex subunit 3.
    
 
 0.605
WN55_08375
UPF0760 protein C2orf29 like protein.
    
 
 0.604
WN55_01533
Trafficking protein particle complex subunit 10.
    
 
 0.592
WN55_04442
Protein PAT1 like protein 1.
    
 
 0.579
WN55_02244
Putative helicase with zinc finger domain.
   
 
 0.557
WN55_06907
Regulator of nonsense transcripts 1 like protein.
    
 
 0.556
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.