STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_02716Transient receptor potential-gamma protein. (1237 aa)    
Predicted Functional Partners:
WN55_06890
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.761
WN55_05157
Patj like protein.
   
 0.738
WN55_05154
Multiple PDZ domain protein.
   
 0.738
WN55_01271
Mothers against decapentaplegic homolog.
    
 0.695
WN55_00720
Mothers against decapentaplegic homolog.
    
 0.695
WN55_11474
Mothers against decapentaplegic homolog.
    
 0.695
WN55_11259
Mothers against decapentaplegic homolog.
    
 0.695
WN55_01699
Mothers against decapentaplegic homolog.
    
 0.695
WN55_01360
Stromal interaction molecule like protein.
    
 0.692
WN55_04098
Transient receptor potential cation channel trpm.
    
0.674
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.