STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04766Actin-like protein 6A; Belongs to the actin family. (440 aa)    
Predicted Functional Partners:
WN55_05278
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
   
 0.984
WN55_07338
Protein polybromo-1.
   
 0.979
WN55_01994
SWI/SNF complex subunit SMARCC2.
    
 0.978
WN55_00700
Transcription activator BRG1.
    
 0.974
WN55_02875
Actin-5C.
    
0.974
WN55_00899
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
0.973
WN55_04377
DNA methyltransferase 1-associated protein 1.
   
 0.973
WN55_08366
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 0.971
WN55_03018
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
   
 0.971
WN55_04742
Enhancer of polycomb-like protein.
    
 0.967
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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