STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04692snRNA-activating protein complex subunit 1. (292 aa)    
Predicted Functional Partners:
WN55_11499
snRNA-activating protein complex subunit 4.
    
 0.997
WN55_09805
Uncharacterized protein.
    
 0.977
WN55_09806
snRNA-activating protein complex subunit 3.
    
 0.977
WN55_09743
Transcription initiation factor IIB.
    
 0.949
WN55_08287
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.865
WN55_10396
Transcription initiation factor IIA subunit 1.
    
  0.854
WN55_01754
TATA-box-binding protein.
   
 0.851
WN55_11091
TATA-box-binding protein.
   
 0.851
WN55_05332
TATA box-binding protein-like protein 1.
   
 0.813
WN55_06430
Transcription initiation factor TFIID subunit 5.
     
 0.713
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
Server load: low (22%) [HD]