STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_06121E3 ubiquitin-protein ligase RFWD2. (643 aa)    
Predicted Functional Partners:
WN55_07800
DET1 like protein.
  
 
 0.968
WN55_02295
DNA damage-binding protein 1.
    
 0.907
WN55_09602
Uncharacterized protein.
    
 0.866
WN55_06122
Cytosol aminopeptidase.
 
      0.842
WN55_05180
Cullin-4B; Belongs to the cullin family.
    
 0.837
WN55_08248
RING-box protein 1A.
    
 0.820
WN55_00629
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.771
WN55_03590
DET1-and DDB1-associated protein 1.
    
  0.767
WN55_00141
Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
    
 0.760
WN55_06502
Ubiquitin-40S ribosomal protein S27a.
    
 0.749
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.