STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_07949THUMP domain-containing protein 3. (441 aa)    
Predicted Functional Partners:
WN55_02198
Intersectin-1.
   
 0.926
WN55_09669
Wiskott-Aldrich syndrome protein.
   
 0.872
WN55_07554
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.738
WN55_03853
Ras-like GTP-binding protein RhoL.
    
 0.704
WN55_06100
Rho-related BTB domain-containing protein 1.
    
 0.704
WN55_10279
Cdc42 like protein.
    
 0.704
WN55_00544
Ras-related C3 botulinum toxin substrate 1.
    
 0.704
WN55_01454
Rho-related GTP-binding protein RhoU.
    
 0.704
WN55_04332
Ras-like GTP-binding protein Rho1.
    
 0.704
WN55_04469
Cdc42 like protein.
    
 0.704
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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