STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_08165Nuclear pore protein. (825 aa)    
Predicted Functional Partners:
WN55_09752
Nuclear pore glycoprotein p62.
   
 0.998
WN55_06401
Nuclear pore complex protein Nup98-Nup96.
   
 0.998
WN55_10951
Putative nucleoporin Nup54.
   
 0.998
WN55_10488
Nucleoporin seh1-A; Belongs to the WD repeat SEC13 family.
   
 0.995
WN55_00634
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
WN55_10241
Protein SEC13 like protein; Belongs to the WD repeat SEC13 family.
    
 0.992
WN55_01967
Nucleoporin Nup43.
   
 0.992
WN55_03821
Putative nucleoporin Nup58.
   
 0.991
WN55_01244
Nucleoporin Ndc1.
   
 0.991
WN55_00954
Protein ELYS.
    
 0.981
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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