STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_08435Harmonin. (891 aa)    
Predicted Functional Partners:
WN55_04285
Usher syndrome type-1G protein like protein.
    
 0.977
WN55_04540
Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.906
WN55_10314
Myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.906
WN55_10239
Myosin-I heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.828
WN55_03789
Cadherin-23.
    
 
 0.789
WN55_04040
Protocadherin-15.
   
 
 0.777
WN55_06349
Intraflagellar transport protein 88 like protein.
    
 0.759
WN55_01300
Intraflagellar transport protein 57 like protein.
    
 0.744
WN55_03453
Intraflagellar transport protein 80 like protein.
    
 0.739
WN55_00629
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.735
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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