STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_09844Uncharacterized protein. (705 aa)    
Predicted Functional Partners:
WN55_00937
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.916
WN55_08782
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.914
WN55_11583
Endoplasmic reticulum lectin 1.
   
 0.914
WN55_05282
E3 ubiquitin-protein ligase AMFR.
   
 0.840
WN55_02301
E3 ubiquitin-protein ligase HRD1.
   
 0.840
WN55_07732
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
   
 0.820
WN55_11578
Spermatogenesis-associated protein 5.
   
 0.820
WN55_07854
Protein TRC8 like protein.
    
 0.786
WN55_05735
Chitin synthase 8.
 
 0.748
WN55_01718
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
   
   0.737
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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