STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_11267Signal recognition particle 19 kDa protein. (152 aa)    
Predicted Functional Partners:
WN55_01046
Signal recognition particle 9 kDa protein.
   
 0.999
WN55_06035
Signal recognition particle 68 kDa protein.
    
 0.999
WN55_03922
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 0.998
WN55_02317
Signal recognition particle 14 kDa protein.
   
 0.997
WN55_02943
Signal recognition particle 54 kDa protein.
   
 0.985
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.985
WN55_05123
Signal recognition particle receptor subunit alpha.
   
 
 0.966
WN55_07266
Signal recognition particle receptor subunit beta.
   
 
 0.948
WN55_07696
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.938
WN55_01445
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
  0.925
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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