WN55_10798 protein (Dufourea novaeangliae) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

WN55_10798

Leucine-rich repeat-containing protein 40. (602 aa)

Predicted Functional Partners:

WN55_09602

0.779

WN55_08993

0.756

WN55_11132

0.716

WN55_11127

0.716

WN55_05894

0.703

WN55_01722

0.696

WN55_05678

0.681

WN55_11332

0.648

WN55_09049

0.646

WN55_07451

0.641

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_01722	WN55_09602	A0A154PGT0	A0A154NYV3	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.927
WN55_01722	WN55_10798	A0A154PGT0	A0A154PA54	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Leucine-rich repeat-containing protein 40.	0.696
WN55_01722	WN55_11127	A0A154PGT0	A0A154PDC4	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.	0.702
WN55_01722	WN55_11132	A0A154PGT0	A0A154PBV2	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Peripheral plasma membrane protein CASK.	0.702
WN55_05678	WN55_09602	A0A154PPF0	A0A154NYV3	LIM domain-containing protein.	Uncharacterized protein.	0.450
WN55_05678	WN55_10798	A0A154PPF0	A0A154PA54	LIM domain-containing protein.	Leucine-rich repeat-containing protein 40.	0.681
WN55_05894	WN55_10798	A0A154PMW9	A0A154PA54	Protein canopy like protein 3.	Leucine-rich repeat-containing protein 40.	0.703
WN55_07451	WN55_08993	A0A154PS20	A0A154P817	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Calcium homeostasis endoplasmic reticulum protein.	0.999
WN55_07451	WN55_09049	A0A154PS20	A0A154P7T6	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.999
WN55_07451	WN55_10798	A0A154PS20	A0A154PA54	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Leucine-rich repeat-containing protein 40.	0.641
WN55_07451	WN55_11332	A0A154PS20	A0A154PA99	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.999
WN55_08993	WN55_07451	A0A154P817	A0A154PS20	Calcium homeostasis endoplasmic reticulum protein.	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
WN55_08993	WN55_09049	A0A154P817	A0A154P7T6	Calcium homeostasis endoplasmic reticulum protein.	Uncharacterized protein.	0.999
WN55_08993	WN55_10798	A0A154P817	A0A154PA54	Calcium homeostasis endoplasmic reticulum protein.	Leucine-rich repeat-containing protein 40.	0.756
WN55_08993	WN55_11332	A0A154P817	A0A154PA99	Calcium homeostasis endoplasmic reticulum protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
WN55_09049	WN55_07451	A0A154P7T6	A0A154PS20	Uncharacterized protein.	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
WN55_09049	WN55_08993	A0A154P7T6	A0A154P817	Uncharacterized protein.	Calcium homeostasis endoplasmic reticulum protein.	0.999
WN55_09049	WN55_10798	A0A154P7T6	A0A154PA54	Uncharacterized protein.	Leucine-rich repeat-containing protein 40.	0.646
WN55_09049	WN55_11332	A0A154P7T6	A0A154PA99	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
WN55_09602	WN55_01722	A0A154NYV3	A0A154PGT0	Uncharacterized protein.	Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.927

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Network Stats

number of nodes:

11

number of edges:

37

average node degree:

6.73

avg. local clustering coefficient:

0.793

expected number of edges:

39

PPI enrichment p-value:

0.658

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000160

Phosphorelay signal transduction system

6 of 122

1.26

1.16

0.00047

GO:0050794

Regulation of cellular process

8 of 568

0.72

0.54

0.0038

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0043565

Sequence-specific DNA binding

5 of 89

1.32

1.07

0.0018

GO:0052621

Diguanylate cyclase activity

3 of 19

1.77

1.04

0.0084

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4528

Diguanylate cyclase activity, and Putative diguanylate phosphodiesterase

8 of 25

2.08

5.22

2.65e-13

CL:4530

Diguanylate cyclase activity, and Putative diguanylate phosphodiesterase

7 of 18

2.16

5.01

5.40e-12

CL:4521

Diguanylate cyclase, and HD-GYP domain

10 of 50

1.87

4.98

2.06e-15

CL:4531

Putative diguanylate phosphodiesterase, and Domain present in phytochromes and cGMP-specific phosphodiesterases.

6 of 13

2.24

4.57

1.95e-10

CL:4534

Mixed, incl. Double Cache domain 1, and CHASE domain

3 of 6

2.27

2.07

0.00011

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00267

Diguanylate cyclase

9 of 50

1.83

4.45

9.02e-14

SM00065

Domain present in phytochromes and cGMP-specific phosphodiesterases.

4 of 14

2.03

2.54

5.11e-06

SM00091

PAS domain

4 of 52

1.46

1.37

0.00039

SM00086

Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)

3 of 36

1.49

1.08

0.0038

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