STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00286Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (331 aa)    
Predicted Functional Partners:
WN55_01987
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.999
WN55_05420
Geranylgeranyl transferase type-1 subunit beta.
    
 0.998
WN55_10144
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.963
WN55_02329
CAAX prenyl protease 2.
     
 0.961
WN55_01537
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.957
WN55_10934
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.956
WN55_02251
Nogo-B receptor.
     
 0.941
WN55_06133
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
     
 0.935
WN55_00231
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
     
 0.928
WN55_07661
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.855
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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