STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_11429DUF3421 domain-containing protein. (104 aa)    
Predicted Functional Partners:
WN55_06440
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.806
WN55_04182
Sorbin and SH3 domain-containing protein 1.
    
 
 0.645
WN55_04179
PDZ and LIM domain protein 7.
    
 
 0.645
WN55_10161
Ribosome production factor 2 like protein.
   
 
 0.638
WN55_09141
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.578
WN55_10274
Nucleolysin TIAR.
    
   0.564
WN55_04800
Nucleolysin TIA-1 isoform p40.
    
   0.564
WN55_10668
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.529
WN55_09907
60S ribosomal protein L5.
    
 
 0.518
WN55_09908
60S ribosomal protein L5.
    
 
 0.518
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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