STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00324PDZ and LIM domain protein Zasp. (95 aa)    
Predicted Functional Partners:
WN55_01300
Intraflagellar transport protein 57 like protein.
    
 0.744
WN55_03453
Intraflagellar transport protein 80 like protein.
    
 0.739
WN55_00629
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.735
WN55_10389
TRAF3-interacting protein 1.
    
 0.734
WN55_11132
Peripheral plasma membrane protein CASK.
    
 0.734
WN55_11127
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.734
WN55_10043
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.732
WN55_06349
Intraflagellar transport protein 88 like protein.
    
 0.729
WN55_00072
Partitioning defective protein 6.
    
 0.726
WN55_00627
Clusterin-associated protein 1.
    
 0.722
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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