STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00897ATP-dependent RNA helicase DHX8. (1169 aa)    
Predicted Functional Partners:
WN55_08993
Calcium homeostasis endoplasmic reticulum protein.
   
 0.962
WN55_06120
Pre-mRNA-splicing factor SLU7.
    
 0.954
WN55_11494
Pre-mRNA-processing factor 17.
   
 0.951
WN55_04752
Pre-mRNA-splicing factor Syf2.
    
 0.927
WN55_00543
Pre-mRNA-splicing factor 18.
   
 0.918
WN55_03369
Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family.
   
 0.898
WN55_08081
Coiled-coil domain-containing protein 94.
    
 0.897
WN55_05578
Serine/arginine repetitive matrix protein 2.
    
 0.897
WN55_01583
Small nuclear ribonucleoprotein Sm D2.
   
 0.894
WN55_04196
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.894
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.