STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00928Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (705 aa)    
Predicted Functional Partners:
WN55_02109
Autophagy-related protein 3.
    
 0.999
WN55_04774
Gamma-aminobutyric acid receptor-associated protein.
   
 0.999
WN55_06037
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.993
WN55_10364
Baculoviral IAP repeat-containing protein 6.
  
 0.989
WN55_08393
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.983
WN55_02337
Putative E3 ubiquitin-protein ligase TRIP12.
    
 0.970
WN55_10959
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.935
WN55_07733
WD repeat domain phosphoinositide-interacting protein 2.
    
 0.922
WN55_05305
Ubiquitin-conjugating enzyme E2 J2.
    
 0.901
WN55_07079
Ubiquitin-60S ribosomal protein L40.
    
 0.875
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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