STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_10975Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (318 aa)    
Predicted Functional Partners:
WN55_08525
Importin subunit beta-1.
    
   0.957
WN55_03528
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
 
 
   0.951
WN55_02233
Protein penguin.
   
 
 0.947
WN55_10161
Ribosome production factor 2 like protein.
   
   0.940
WN55_04189
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
   0.940
WN55_01409
Ribosome biogenesis protein BRX1 like protein.
   
   0.938
WN55_09848
Putative rRNA-processing protein EBP2 like protein.
   
   0.936
WN55_01817
Bystin.
   
 
 0.928
WN55_07924
Nucleolar complex protein 2 like protein.
   
 
 0.926
WN55_07948
Putative ribosome production factor 1.
   
   0.922
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.