STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_11021Methyl-CpG-binding domain protein 2. (223 aa)    
Predicted Functional Partners:
WN55_10115
Metastasis-associated protein MTA1.
   
 0.987
WN55_09925
Putative histone-binding protein Caf1.
    
 0.972
WN55_07218
Chromodomain-helicase-DNA-binding protein Mi-2 like protein.
    
 0.972
WN55_05245
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.950
WN55_09768
Transcriptional repressor p66-beta.
   
 0.923
WN55_02994
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.923
WN55_05182
Histone deacetylase 6.
    
 0.877
WN55_06576
Paired amphipathic helix protein Sin3a.
    
 0.827
WN55_06411
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.813
WN55_08235
PHD finger protein 21A.
    
 0.813
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.