STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_11138Autophagy-related protein 16-1. (168 aa)    
Predicted Functional Partners:
WN55_10959
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.983
WN55_06037
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.982
WN55_07733
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.978
WN55_11135
Autophagy-related protein 16-1.
 
  
  0.972
WN55_02109
Autophagy-related protein 3.
   
 0.953
WN55_04868
RB1-inducible coiled-coil protein 1.
   
 0.916
WN55_10442
Beclin-1-like protein.
    
 0.854
WN55_04774
Gamma-aminobutyric acid receptor-associated protein.
    
 0.829
WN55_05569
Serine/threonine-protein kinase ULK2.
    
 
 0.829
WN55_10055
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 
 0.809
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.