STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_11138Autophagy-related protein 16-1. (168 aa)    
Predicted Functional Partners:
WN55_10959
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.997
WN55_06037
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.996
WN55_11135
Autophagy-related protein 16-1.
 
  
  0.992
WN55_02109
Autophagy-related protein 3.
   
 0.991
WN55_07733
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.989
WN55_04868
RB1-inducible coiled-coil protein 1.
   
 0.988
WN55_08393
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.910
WN55_04774
Gamma-aminobutyric acid receptor-associated protein.
    
 0.907
WN55_08443
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 
 0.903
WN55_02226
WD repeat domain phosphoinositide-interacting protein 4.
     
 0.901
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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