STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_10742Codanin-1. (833 aa)    
Predicted Functional Partners:
WN55_09772
Histone chaperone asf1.
    
 
 0.973
WN55_10248
Uncharacterized protein C15orf41 like protein.
    
 
 0.946
WN55_08200
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
 
 0.761
WN55_08628
Protein downstream neighbor of son like protein.
    
   0.748
WN55_09361
Neurexin-4.
    
 
 0.745
WN55_06351
Protein zwilch like protein.
      
 0.666
WN55_08639
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.627
WN55_05054
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
      
 0.611
WN55_04500
Putative trans-2-enoyl-CoA reductase, mitochondrial.
    
 
 0.600
WN55_05157
Patj like protein.
      
 0.572
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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