STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_11427Phosphatidylinositol-glycan biosynthesis class F protein. (113 aa)    
Predicted Functional Partners:
WN55_04489
GPI ethanolamine phosphate transferase 2.
    
 0.923
WN55_09632
GPI ethanolamine phosphate transferase 3.
    
 0.912
WN55_10549
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.890
WN55_10806
Mannosyltransferase.
     
 0.886
WN55_03526
GPI transamidase component PIG-T.
     
 0.863
WN55_11426
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
      0.849
WN55_10093
GPI ethanolamine phosphate transferase 1.
    
 0.828
WN55_07249
GPI transamidase component PIG-S.
     
 0.794
WN55_08779
Glycosylphosphatidylinositol anchor attachment 1 protein.
     
 0.778
WN55_08752
Serine palmitoyltransferase 1.
     
 0.764
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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