STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_0017815-hydroxyprostaglandin dehydrogenase [NAD(+)]; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
WN55_08130
Trifunctional enzyme subunit alpha, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.870
WN55_07291
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial.
   
 0.870
WN55_11347
Putative enoyl-CoA hydratase, mitochondrial.
   
 0.870
WN55_01952
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.860
WN55_03283
Short-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.860
WN55_06619
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.860
WN55_08668
Dehydrogenase/reductase SDR family member 4.
  
 
 0.804
WN55_05951
Aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
 0.773
WN55_09366
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.747
WN55_08910
Aldehyde dehydrogenase X, mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
 0.742
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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