STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_01194RT_RNaseH_2 domain-containing protein. (85 aa)    
Predicted Functional Partners:
WN55_09925
Putative histone-binding protein Caf1.
    
 0.677
WN55_05050
Protein lin-52 like protein.
    
 0.675
WN55_05811
Protein lin-54 like protein.
    
 0.669
WN55_08233
Protein lin-9 like protein.
    
 0.661
WN55_00395
Xylosyltransferase oxt.
    
 0.608
WN55_08501
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.590
WN55_02286
Retinoblastoma-like protein 1.
    
  0.575
WN55_10020
Uncharacterized protein.
    
 0.565
WN55_07875
Replication protein A 32 kDa subunit.
    
 0.565
WN55_00655
Transcription factor E2F5.
    
 0.551
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.