STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00986Ceramide synthase 6. (375 aa)    
Predicted Functional Partners:
WN55_04348
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.918
WN55_02266
Sphingolipid delta(4)-desaturase DES1; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
    
 0.891
WN55_01313
Sphingosine-1-phosphate phosphatase 1.
    
 0.886
WN55_01076
Putative neutral sphingomyelinase.
     
 0.886
WN55_03873
Sphingosine kinase 2.
     
 0.878
WN55_06422
Ceramide glucosyltransferase.
     
 0.875
WN55_01117
3-ketodihydrosphingosine reductase.
     
 0.875
WN55_08153
Ceramide kinase.
     
 0.872
WN55_09031
Neutral ceramidase.
     
 0.872
WN55_07903
Uncharacterized protein C5orf4 like protein; Belongs to the sterol desaturase family.
   
 0.866
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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