STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_0088639S ribosomal protein L30, mitochondrial. (177 aa)    
Predicted Functional Partners:
WN55_10359
39S ribosomal protein L17, mitochondrial.
   
 
 0.996
WN55_08058
Putative 39S ribosomal protein L23, mitochondrial.
   
   0.996
WN55_10773
39S ribosomal protein L47, mitochondrial.
   
   0.995
WN55_03546
39S ribosomal protein L19, mitochondrial.
   
 
 0.995
WN55_08899
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.994
WN55_00127
39S ribosomal protein L41, mitochondrial.
   
 
 0.994
WN55_00976
39S ribosomal protein L13, mitochondrial.
   
   0.994
WN55_04609
Putative 28S ribosomal protein S16, mitochondrial.
   
   0.993
WN55_01870
39S ribosomal protein L16, mitochondrial.
   
 0.993
WN55_06942
Putative 39S ribosomal protein L49, mitochondrial.
   
 
 0.991
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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