STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_00364Leucine-rich repeat-containing protein 47. (512 aa)    
Predicted Functional Partners:
WN55_09358
Putative phenylalanine--tRNA ligase alpha subunit.
  
 0.995
WN55_11529
Putative phenylalanine--tRNA ligase, mitochondrial.
  
 0.986
WN55_02274
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.977
WN55_04681
Tyrosine--tRNA ligase.
  
  
 0.971
WN55_04637
Isoleucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.921
WN55_10392
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.880
WN55_01115
Putative ribosome biogenesis protein RLP24.
 
 
    0.862
WN55_07461
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 
 0.861
WN55_10202
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.839
WN55_10023
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.830
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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