WN55_01610 protein (Dufourea novaeangliae) - STRING interaction network

Nodes:

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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[Homology]

Score

WN55_01610

Cysteine-rich motor neuron 1 protein. (687 aa)

Predicted Functional Partners:

WN55_00586

0.804

WN55_00629

0.737

WN55_00794

0.736

WN55_09772

0.727

WN55_04523

0.726

WN55_05984

0.667

WN55_10488

0.647

WN55_03215

0.647

WN55_01650

0.645

WN55_01618

0.641

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00586	WN55_01610	A0A154NY52	A0A154PGD1	Nucleoporin GLE1.	Cysteine-rich motor neuron 1 protein.	0.804
WN55_00586	WN55_05984	A0A154NY52	A0A154PND8	Nucleoporin GLE1.	mRNA export factor.	0.984
WN55_00586	WN55_10488	A0A154NY52	A0A154P403	Nucleoporin GLE1.	Nucleoporin seh1-A; Belongs to the WD repeat SEC13 family.	0.914
WN55_00629	WN55_00794	A0A154NZP0	A0A154PCW3	Leucine-rich repeat serine/threonine-protein kinase 1.	Kinase suppressor of Ras 2.	0.941
WN55_00629	WN55_01610	A0A154NZP0	A0A154PGD1	Leucine-rich repeat serine/threonine-protein kinase 1.	Cysteine-rich motor neuron 1 protein.	0.737
WN55_00629	WN55_03215	A0A154NZP0	A0A154PKY4	Leucine-rich repeat serine/threonine-protein kinase 1.	Breast cancer anti-estrogen resistance protein 1.	0.861
WN55_00629	WN55_04523	A0A154NZP0	A0A154P169	Leucine-rich repeat serine/threonine-protein kinase 1.	Uncharacterized protein.	0.834
WN55_00794	WN55_00629	A0A154PCW3	A0A154NZP0	Kinase suppressor of Ras 2.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.941
WN55_00794	WN55_01610	A0A154PCW3	A0A154PGD1	Kinase suppressor of Ras 2.	Cysteine-rich motor neuron 1 protein.	0.736
WN55_01610	WN55_00586	A0A154PGD1	A0A154NY52	Cysteine-rich motor neuron 1 protein.	Nucleoporin GLE1.	0.804
WN55_01610	WN55_00629	A0A154PGD1	A0A154NZP0	Cysteine-rich motor neuron 1 protein.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.737
WN55_01610	WN55_00794	A0A154PGD1	A0A154PCW3	Cysteine-rich motor neuron 1 protein.	Kinase suppressor of Ras 2.	0.736
WN55_01610	WN55_01618	A0A154PGD1	A0A154PGD8	Cysteine-rich motor neuron 1 protein.	Importin-7.	0.641
WN55_01610	WN55_01650	A0A154PGD1	A0A154PIC9	Cysteine-rich motor neuron 1 protein.	Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.645
WN55_01610	WN55_03215	A0A154PGD1	A0A154PKY4	Cysteine-rich motor neuron 1 protein.	Breast cancer anti-estrogen resistance protein 1.	0.647
WN55_01610	WN55_04523	A0A154PGD1	A0A154P169	Cysteine-rich motor neuron 1 protein.	Uncharacterized protein.	0.726
WN55_01610	WN55_05984	A0A154PGD1	A0A154PND8	Cysteine-rich motor neuron 1 protein.	mRNA export factor.	0.667
WN55_01610	WN55_09772	A0A154PGD1	A0A154NZC4	Cysteine-rich motor neuron 1 protein.	Histone chaperone asf1.	0.727
WN55_01610	WN55_10488	A0A154PGD1	A0A154P403	Cysteine-rich motor neuron 1 protein.	Nucleoporin seh1-A; Belongs to the WD repeat SEC13 family.	0.647
WN55_01618	WN55_01610	A0A154PGD8	A0A154PGD1	Importin-7.	Cysteine-rich motor neuron 1 protein.	0.641

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Network Stats

number of nodes:

2

number of edges:

1

average node degree:

1

avg. local clustering coefficient:

1

expected number of edges:

1

PPI enrichment p-value:

0.5

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000105

Histidine biosynthetic process

5 of 13

2.3

3.87

1.46e-08

GO:0009073

Aromatic amino acid family biosynthetic process

4 of 17

2.08

2.57

5.44e-06

GO:0008652

Cellular amino acid biosynthetic process

9 of 183

1.4

2.25

3.71e-09

GO:0006520

Cellular amino acid metabolic process

10 of 311

1.22

1.76

3.71e-09

GO:0009095

Aromatic amino acid family biosynthetic process, prephenate pathway

2 of 2

2.71

1.56

0.0014

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016836

Hydro-lyase activity

3 of 38

1.61

0.67

0.0478

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

10 of 1823

0.45

0.33

0.0134

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1575

Aromatic amino acid family biosynthetic process, and Histidine biosynthesis

8 of 28

2.17

5.69

6.02e-14

CL:1515

Amino-acid biosynthesis, and Aminotransferase class IV

10 of 58

1.95

5.46

4.37e-16

CL:1608

Histidine biosynthesis

5 of 10

2.41

4.15

6.00e-09

CL:1611

Histidine biosynthesis

3 of 5

2.49

2.28

5.48e-05

CL:1576

Aromatic amino acid family biosynthetic process

3 of 16

1.98

1.56

0.00082

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00400

Phenylalanine, tyrosine and tryptophan biosynthesis

5 of 25

2.01

3.21

8.92e-08

map00340

Histidine metabolism

5 of 29

1.95

3.08

1.16e-07

map01230

Biosynthesis of amino acids

9 of 231

1.3

1.99

2.63e-09

map00401

Novobiocin biosynthesis

2 of 3

2.53

1.69

0.00076

map00360

Phenylalanine metabolism

3 of 36

1.63

1.37

0.00092

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005737

Cytoplasm

11 of 1419

0.6

0.52

8.49e-05

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0368

Histidine biosynthesis

5 of 12

2.33

4.05

6.80e-09

KW-0028

Amino-acid biosynthesis

8 of 88

1.67

3.22

1.88e-10

KW-0057

Aromatic amino acid biosynthesis

3 of 14

2.04

1.79

0.00028

KW-0822

Tryptophan biosynthesis

2 of 6

2.23

1.26

0.0044

KW-0456

Lyase

4 of 110

1.27

0.99

0.0027

(more ...)

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