STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_01877Leucine-rich repeat-containing protein 51. (199 aa)    
Predicted Functional Partners:
WN55_08993
Calcium homeostasis endoplasmic reticulum protein.
   
 0.998
WN55_09049
Uncharacterized protein.
   
 0.927
WN55_11332
Small nuclear ribonucleoprotein Sm D3.
   
 0.921
WN55_01583
Small nuclear ribonucleoprotein Sm D2.
   
 0.917
WN55_07864
Small nuclear ribonucleoprotein G.
   
 0.912
WN55_03399
Splicing factor 3B subunit 1.
   
 0.910
WN55_07451
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.907
WN55_06915
Splicing factor 3B subunit 3.
    
 0.905
WN55_04196
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.903
WN55_10094
Splicing factor 3B subunit 2.
   
 0.902
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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