WN55_02503 protein (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WN55_02503

Uncharacterized protein. (259 aa)

Predicted Functional Partners:

WN55_02502

0.869

WN55_02493

0.834

WN55_02488

0.832

WN55_02494

0.753

WN55_08834

0.746

WN55_02497

0.656

WN55_07436

0.516

WN55_02501

0.475

WN55_02504

0.426

WN55_02489

0.420

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_02488	WN55_02489	A0A154PH50	A0A154PII5	Uncharacterized protein.	Uncharacterized protein.	0.966
WN55_02488	WN55_02493	A0A154PH50	A0A154PH41	Uncharacterized protein.	Uncharacterized protein.	0.944
WN55_02488	WN55_02494	A0A154PH50	A0A154PH09	Uncharacterized protein.	Uncharacterized protein.	0.527
WN55_02488	WN55_02497	A0A154PH50	A0A154PGX7	Uncharacterized protein.	Uncharacterized protein.	0.590
WN55_02488	WN55_02502	A0A154PH50	A0A154PH04	Uncharacterized protein.	Uncharacterized protein.	0.899
WN55_02488	WN55_02503	A0A154PH50	A0A154PH49	Uncharacterized protein.	Uncharacterized protein.	0.832
WN55_02488	WN55_07436	A0A154PH50	A0A154P2E5	Uncharacterized protein.	Uncharacterized protein.	0.408
WN55_02489	WN55_02488	A0A154PII5	A0A154PH50	Uncharacterized protein.	Uncharacterized protein.	0.966
WN55_02489	WN55_02493	A0A154PII5	A0A154PH41	Uncharacterized protein.	Uncharacterized protein.	0.755
WN55_02489	WN55_02497	A0A154PII5	A0A154PGX7	Uncharacterized protein.	Uncharacterized protein.	0.439
WN55_02489	WN55_02502	A0A154PII5	A0A154PH04	Uncharacterized protein.	Uncharacterized protein.	0.565
WN55_02489	WN55_02503	A0A154PII5	A0A154PH49	Uncharacterized protein.	Uncharacterized protein.	0.420
WN55_02493	WN55_02488	A0A154PH41	A0A154PH50	Uncharacterized protein.	Uncharacterized protein.	0.944
WN55_02493	WN55_02489	A0A154PH41	A0A154PII5	Uncharacterized protein.	Uncharacterized protein.	0.755
WN55_02493	WN55_02494	A0A154PH41	A0A154PH09	Uncharacterized protein.	Uncharacterized protein.	0.765
WN55_02493	WN55_02497	A0A154PH41	A0A154PGX7	Uncharacterized protein.	Uncharacterized protein.	0.561
WN55_02493	WN55_02502	A0A154PH41	A0A154PH04	Uncharacterized protein.	Uncharacterized protein.	0.808
WN55_02493	WN55_02503	A0A154PH41	A0A154PH49	Uncharacterized protein.	Uncharacterized protein.	0.834
WN55_02493	WN55_07436	A0A154PH41	A0A154P2E5	Uncharacterized protein.	Uncharacterized protein.	0.610
WN55_02493	WN55_08834	A0A154PH41	A0A154P033	Uncharacterized protein.	Cuticlin-1.	0.713