STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_02343Charged multivesicular body protein 1b. (197 aa)    
Predicted Functional Partners:
WN55_02292
Charged multivesicular body protein 2a.
   
0.998
WN55_02345
IST1 like protein.
    
 
 0.995
WN55_09515
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.994
WN55_11255
Charged multivesicular body protein 3.
 
 
 0.993
WN55_03603
Charged multivesicular body protein 4b.
    
 0.991
WN55_05970
Charged multivesicular body protein 5.
   
 0.991
WN55_09892
Vacuolar protein sorting-associated protein VTA1 like protein.
    
 0.984
WN55_04219
Uncharacterized protein.
    
 0.978
WN55_08294
Charged multivesicular body protein 6.
   
 0.944
WN55_10998
MIT domain-containing protein 1.
    
 
 0.933
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.