STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_03080Homogentisate 1,2-dioxygenase. (145 aa)    
Predicted Functional Partners:
WN55_00826
4-hydroxyphenylpyruvate dioxygenase.
  
 0.990
WN55_03079
Homogentisate 1,2-dioxygenase.
 
     0.951
WN55_07002
Fumarylacetoacetate hydrolase domain-containing protein 2A.
  
 
 0.921
WN55_10211
Putative maleylacetoacetate isomerase 2; Belongs to the GST superfamily.
  
 
 0.873
WN55_06419
Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.758
WN55_04140
YrdC domain-containing protein, mitochondrial.
     
 0.748
WN55_06744
Tyrosine 3-monooxygenase.
  
  
 0.669
WN55_02401
Protein henna.
  
  
 0.669
WN55_09190
Valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.598
WN55_02799
Glutathione S-transferase 1, isoform D.
  
 
 0.586
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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