STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_02831Sphingomyelin phosphodiesterase. (635 aa)    
Predicted Functional Partners:
WN55_01076
Putative neutral sphingomyelinase.
     
 0.942
WN55_06422
Ceramide glucosyltransferase.
     
 0.932
WN55_08153
Ceramide kinase.
    
 0.930
WN55_05044
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.928
WN55_09031
Neutral ceramidase.
     
 0.926
WN55_04348
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.923
WN55_01313
Sphingosine-1-phosphate phosphatase 1.
     
 0.920
WN55_05668
Lipid phosphate phosphohydrolase 1.
     
 0.916
WN55_07789
Glucosylceramidase.
   
 
 0.872
WN55_02192
Glucosylceramidase.
   
 
 0.872
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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