STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_02935Putative ATP-dependent RNA helicase Dbp73D. (674 aa)    
Predicted Functional Partners:
WN55_07422
Putative RNA-binding protein 19.
   
   0.927
WN55_00147
U3 small nucleolar RNA-associated protein 14 like protein A.
   
 0.919
WN55_02668
Nucleolar protein 6.
   
 0.912
WN55_09523
Putative ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family.
  
0.901
WN55_04859
HEAT repeat-containing protein 1.
   
  0.884
WN55_04881
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.868
WN55_01107
WD repeat-containing protein 74.
   
 
 0.858
WN55_10295
Digestive organ expansion factor like protein.
   
 
 0.857
WN55_07804
Putative ATP-dependent RNA helicase DDX56.
  
 
0.856
WN55_08880
Suppressor of SWI4 1 like protein.
   
   0.853
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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