STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_02830Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase; Belongs to the ROX family. (613 aa)    
Predicted Functional Partners:
WN55_08830
60S ribosomal protein L8.
    
 
 0.950
WN55_02510
39S ribosomal protein L2, mitochondrial.
    
 
 0.639
WN55_08937
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.638
WN55_08602
Histone H3; Belongs to the histone H3 family.
    
 0.524
WN55_03639
Histone H3; Belongs to the histone H3 family.
    
 0.524
WN55_04369
Histone H3; Belongs to the histone H3 family.
    
 0.524
WN55_03377
Myeloid differentiation primary response protein MyD88.
    
 0.520
WN55_07706
JmjC domain-containing protein 4.
      
 0.506
WN55_03487
Metal-response element-binding transcription factor 2.
      
 0.499
WN55_10436
HSPB1-associated protein 1.
      
 0.493
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.