STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04204Zinc finger CCHC domain-containing protein 7. (1333 aa)    
Predicted Functional Partners:
WN55_01615
Superkiller viralicidic activity 2-like 2.
   
 
 0.962
WN55_07341
PAP-associated domain-containing protein 5.
   
 
 0.943
WN55_10240
Helicase SKI2W.
   
 
 0.702
WN55_10145
Protein SCAF8.
    
 
 0.612
WN55_10861
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
      
 0.604
WN55_07404
Nuclear cap-binding protein subunit 1.
    
 
 0.599
WN55_06149
Exosome complex component CSL4.
   
  
 0.587
WN55_03692
U3 small nucleolar RNA-associated protein 18 like protein.
   
 
 0.586
WN55_03734
Exosome complex component RRP45.
   
  
 0.563
WN55_01645
Exosome complex component RRP43.
   
 
 0.557
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.