STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_03354Lysine-specific demethylase 7. (935 aa)    
Predicted Functional Partners:
WN55_03565
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.874
WN55_04368
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.863
WN55_08602
Histone H3; Belongs to the histone H3 family.
    
 0.862
WN55_03639
Histone H3; Belongs to the histone H3 family.
    
 0.862
WN55_04369
Histone H3; Belongs to the histone H3 family.
    
 0.862
WN55_08760
Lysine-specific demethylase 6A.
   
 0.816
WN55_03377
Myeloid differentiation primary response protein MyD88.
    
 0.804
WN55_01365
Histone-lysine N-methyltransferase SUV39H2.
    
 0.785
WN55_02168
Polyubiquitin-A.
    
 0.722
WN55_05418
Polyubiquitin-A.
    
 0.722
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.