STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04273Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
WN55_08716
Phosphatidate phosphatase LPIN2.
     
 0.643
WN55_04587
CTD small phosphatase-like protein 2.
    
 0.637
WN55_01505
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1.
    
 0.637
WN55_01860
CTD nuclear envelope phosphatase 1 like protein.
    
 0.637
WN55_02528
Ubiquitin-like domain-containing CTD phosphatase 1.
    
 0.637
WN55_01548
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.613
WN55_01541
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.613
WN55_05311
Cytoplasmic phosphatidylinositol transfer protein 1.
     
 0.542
WN55_03282
Phosphatidylinositol transfer protein alpha isoform.
     
 0.542
WN55_05582
Protein retinal degeneration B.
     
 0.542
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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